Elucidata: From Raw Data to Curated Resource: Navigating Complexities of Single Cell Curation

Biological databases are notorious for poor data standards, and public single cell data is no exception. The issues can be many: Lack of standards for cell-level metadata deposition, variable data processing pipelines or missing cell annotations. In this webinar, our experts dive into these challenges and lessons learned while curating thousands of single cell studies from the public domain.

Topics they’ll discuss:

- An expert vetted workflow for assigning cell type identity to single cell clusters

- Engineering raw single cell files from publications (count matrix, cell annotations, marker information, metadata) into an analysis-ready H5AD format

- How Polly's infrastructure facilitates the retrieval and analysis of an Atlas of 1700 curated single cell datasets.

Speakers:
- Richa Mudgal, PhD, Solutions Manager
- Shruti Desai, Bioinformatics Engineer

01:09:00